Author: Amrita Banerjee; Dipannita Santra; Smarajit Maiti
Title: Energetics based epitope screening in SARS CoV-2 (COVID 19) spike glycoprotein by Immuno-informatic analysis aiming to a suitable vaccine development Document date: 2020_4_5
ID: iy4knx7j_13
Snippet: Sequence comparisons among selected CoV spike glycoproteins were conducted through multiple sequence alignment using Clustal X2 [26] . Conserved motifs were identified using MEME Suite (http://meme.sdsc.edu/meme/cgi-bin/mast.cgi) server. MEME Suite represents the ungapped conserved sequences which are frequently present in a group of related sequences. The 7 motif number has been defined in the current study for motif finding. Whereas, GLAM2Scan .....
Document: Sequence comparisons among selected CoV spike glycoproteins were conducted through multiple sequence alignment using Clustal X2 [26] . Conserved motifs were identified using MEME Suite (http://meme.sdsc.edu/meme/cgi-bin/mast.cgi) server. MEME Suite represents the ungapped conserved sequences which are frequently present in a group of related sequences. The 7 motif number has been defined in the current study for motif finding. Whereas, GLAM2Scan tools was used for the identification of gapped motifs within the related sequences. Conserved motifs were represented through LOGO using GLAM2Scan tools of MEME Suite server.
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