Author: Enrico Lavezzo; Michele Berselli; Ilaria Frasson; Rosalba Perrone; Giorgio Palù; Alessandra R. Brazzale; Sara N. Richter; Stefano Toppo
Title: G-quadruplex forming sequences in the genome of all known human viruses: a comprehensive guide Document date: 2018_6_11
ID: c3lmmll6_31
Snippet: Interestingly, few viruses display a smaller amount of G4 patterns than expected: both Sagiyama virus and Human coronavirus HKU1 are depleted of G4s belonging to GG-islands category in the positive genome strand when compared with both simulation strategies based on single nucleotide assembling and GG-island reshuffling. In addition, Human parainfluenza virus 2 is poor of G4 patterns made of GG-island in the positive genome strand but is enriched.....
Document: Interestingly, few viruses display a smaller amount of G4 patterns than expected: both Sagiyama virus and Human coronavirus HKU1 are depleted of G4s belonging to GG-islands category in the positive genome strand when compared with both simulation strategies based on single nucleotide assembling and GG-island reshuffling. In addition, Human parainfluenza virus 2 is poor of G4 patterns made of GG-island in the positive genome strand but is enriched in both GG-and GGG-type G4s in the negative strand.
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