Author: Xia, Qiâ€Dong; Xun, Yang; Lu, Junâ€Lin; Lu, Yuâ€Chao; Yang, Yuanâ€Yuan; Zhou, Peng; Hu, Jia; Li, Cong; Wang, Shaoâ€Gang
Title: Network pharmacology and molecular docking analyses on Lianhua Qingwen capsule indicate Akt1 is a potential target to treat and prevent COVIDâ€19 Cord-id: r4wzi3p8 Document date: 2020_11_3
ID: r4wzi3p8
Snippet: OBJECTIVES: Coronavirus disease 2019 (COVIDâ€19) is rapidly spreading worldwide. Lianhua Qingwen capsule (LQC) has shown therapeutic effects in patients with COVIDâ€19. This study is aimed to discover its molecular mechanism and provide potential drug targets. MATERIALS AND METHODS: An LQC target and COVIDâ€19–related gene set was established using the Traditional Chinese Medicine Systems Pharmacology database and seven diseaseâ€gene databases. Gene ontology (GO), Kyoto Encyclopedia of Gen
Document: OBJECTIVES: Coronavirus disease 2019 (COVIDâ€19) is rapidly spreading worldwide. Lianhua Qingwen capsule (LQC) has shown therapeutic effects in patients with COVIDâ€19. This study is aimed to discover its molecular mechanism and provide potential drug targets. MATERIALS AND METHODS: An LQC target and COVIDâ€19–related gene set was established using the Traditional Chinese Medicine Systems Pharmacology database and seven diseaseâ€gene databases. Gene ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis and proteinâ€protein interaction (PPI) network were performed to discover the potential mechanism. Molecular docking was performed to visualize the patterns of interactions between the effective molecule and targeted protein. RESULTS: A gene set of 65 genes was generated. We then constructed a compoundâ€target network that contained 234 nodes of active compounds and 916 edges of compoundâ€target pairs. The GO and KEGG indicated that LQC can act by regulating immune response, apoptosis and virus infection. PPI network and subnetworks identified nine hub genes. The molecular docking was conducted on the most significant gene Akt1, which is involved in lung injury, lung fibrogenesis and virus infection. Six active compounds of LQC can enter the active pocket of Akt1, namely betaâ€carotene, kaempferol, luteolin, naringenin, quercetin and wogonin, thereby exerting potential therapeutic effects in COVIDâ€19. CONCLUSIONS: The network pharmacological strategy integrates molecular docking to unravel the molecular mechanism of LQC. Akt1 is a promising drug target to reduce tissue damage and help eliminate virus infection.
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