Author: Masaki Tagashira
Title: PhyloFold: Precise and Swift Prediction of RNA Secondary Structures to Incorporate Phylogeny among Homologs Document date: 2020_3_6
ID: l72x4wn3_35
Snippet: The rightmost column shows the ideal time complexity of each program where R is the number of homologs, N is the longest length of the homologs, C is the number of columns in an input sequence alignment. The running time of the programs were measured when γ = 2 0 = 1 across the test set using the MAFFT X-INS-i program to predict input sequence alignments. All the parameter values of the programs were the same as Figure 4 . The computer used is t.....
Document: The rightmost column shows the ideal time complexity of each program where R is the number of homologs, N is the longest length of the homologs, C is the number of columns in an input sequence alignment. The running time of the programs were measured when γ = 2 0 = 1 across the test set using the MAFFT X-INS-i program to predict input sequence alignments. All the parameter values of the programs were the same as Figure 4 . The computer used is the same as Table 4 . The programs were run exploiting as many threads as possible to complete the benchmark in the shortest time.
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