Author: Palmer, Duncan S.; Turner, Isaac; Fidler, Sarah; Frater, John; Goedhals, Dominique; Goulder, Philip; Huang, Kuan-Hsiang Gary; Oxenius, Annette; Phillips, Rodney; Shapiro, Roger; Vuuren, Cloete van; McLean, Angela R.; McVean, Gil
Title: Mapping the drivers of within-host pathogen evolution using massive data sets Document date: 2019_7_9
ID: 100r7w2n_80
Snippet: Before filtering, the combination of these three databases represented a total of 119, 878 + 81, 533 + 45, 161 = 246, 572 and 148, 866 + 88, 780 + 45, 161 = 282, 807 sequences in protease and reverse transcriptase respectively. For the Los Alamos HIV sequence database portion of the reverse transcriptase reference data set, we allow sequence chunks of length >500 nucleotides......
Document: Before filtering, the combination of these three databases represented a total of 119, 878 + 81, 533 + 45, 161 = 246, 572 and 148, 866 + 88, 780 + 45, 161 = 282, 807 sequences in protease and reverse transcriptase respectively. For the Los Alamos HIV sequence database portion of the reverse transcriptase reference data set, we allow sequence chunks of length >500 nucleotides.
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