Author: Chang, Chia Lin; Semyonov, Jenia; Cheng, Po Jen; Huang, Shang Yu; Park, Jae Il; Tsai, Huai-Jen; Lin, Cheng-Yung; Grützner, Frank; Soong, Yung Kuei; Cai, James J.; Hsu, Sheau Yu Teddy
Title: Widespread Divergence of the CEACAM/PSG Genes in Vertebrates and Humans Suggests Sensitivity to Selection Document date: 2013_4_16
ID: 1jogs44p_7
Snippet: Genomic and protein sequences of known CEACAM family genes from humans, mice, rats, and dogs as well as the genomes of major model species were obtained from the NCBI databases (ftp://ftp.ncbi.nlm.nih.gov/genomes), the archive!ensembl database (http://may2012.archive.ensembl.org/index.html), or the JGI database, (http://genome.jgi-psf.org). Sequence alignment was carried out using the program MUSCLE (http:// phylogenomics.berkeley.edu) and Tcoffe.....
Document: Genomic and protein sequences of known CEACAM family genes from humans, mice, rats, and dogs as well as the genomes of major model species were obtained from the NCBI databases (ftp://ftp.ncbi.nlm.nih.gov/genomes), the archive!ensembl database (http://may2012.archive.ensembl.org/index.html), or the JGI database, (http://genome.jgi-psf.org). Sequence alignment was carried out using the program MUSCLE (http:// phylogenomics.berkeley.edu) and Tcoffee (http://tcoffee.crg.cat/ apps/tcoffee/index.html).
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