Author: Menachery, Vineet D.; Schäfer, Alexandra; Burnum-Johnson, Kristin E.; Mitchell, Hugh D.; Eisfeld, Amie J.; Walters, Kevin B.; Nicora, Carrie D.; Purvine, Samuel O.; Casey, Cameron P.; Monroe, Matthew E.; Weitz, Karl K.; Stratton, Kelly G.; Webb-Robertson, Bobbie-Jo M.; Gralinski, Lisa E.; Metz, Thomas O.; Smith, Richard D.; Waters, Katrina M.; Sims, Amy C.; Kawaoka, Yoshihiro; Baric, Ralph S.
Title: MERS-CoV and H5N1 influenza virus antagonize antigen presentation by altering the epigenetic landscape Document date: 2018_1_30
ID: 096gtdy5_31
Snippet: RNA Isolation, Microarray Processing, and Identification of DE. RNA isolation and microarray processing from Calu3 cells was carried out as described (40) . DE was determined by comparing virus-infected replicates to time-matched mock replicates. Criteria for DE in determining the consensus ISG list were an absolute log 2 fold change of >1.5 and a false discovery rate (FDR)-adjusted P value of <0.05 for a given time point......
Document: RNA Isolation, Microarray Processing, and Identification of DE. RNA isolation and microarray processing from Calu3 cells was carried out as described (40) . DE was determined by comparing virus-infected replicates to time-matched mock replicates. Criteria for DE in determining the consensus ISG list were an absolute log 2 fold change of >1.5 and a false discovery rate (FDR)-adjusted P value of <0.05 for a given time point.
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