Selected article for: "phylogenetic tree and tree topology"
Author: MYRRHA, Luciana Wanderley; SILVA, Fernanda Miquelitto Figueira; VIDIGAL, Pedro Marcus Pereira; RESENDE, Maurício; BRESSAN, Gustavo Costa; FIETTO, Juliana Lopes Rangel; SANTOS, Marcus Rebouças; SILVA, Laura Morais Nascimento; ASSAO, Viviane Sisdelli; SILVA-JÚNIOR, Abelardo; de ALMEIDA, Márcia Rogéria
Title: Feline coronavirus isolates from a part of Brazil: insights into molecular epidemiology and phylogeny inferred from the 7b gene
  • Document date: 2019_8_23
    • ID: 1s25r3o0_19
    Snippet: To describe the correlation between geographic location, virulence of strains, and genealogy estimated by Bayesian analyses, summary statistics were calculated by BaTS [22] (Tables 1 and 2 ) that correlate the viral phenotypic characters with the shared ancestry (represented by the phylogenetic tree). This correlation was measured by computation of the association index (AI) [33] , parsimony score (PS) [27] , and maximum monophyletic clade size (.....
    Document: To describe the correlation between geographic location, virulence of strains, and genealogy estimated by Bayesian analyses, summary statistics were calculated by BaTS [22] (Tables 1 and 2 ) that correlate the viral phenotypic characters with the shared ancestry (represented by the phylogenetic tree). This correlation was measured by computation of the association index (AI) [33] , parsimony score (PS) [27] , and maximum monophyletic clade size (MC) [22] . The AI and PS test the association between traits (geographic distribution and virulence) and tree topology. The MC index tests whether traits are associated with phylogeny. Stronger phylogeny-trait associations should produce larger monophyletic clades (MC) sharing the same trait [22] .

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