Selected article for: "nucleotide substitution and phylogenetic model"

Author: MYRRHA, Luciana Wanderley; SILVA, Fernanda Miquelitto Figueira; VIDIGAL, Pedro Marcus Pereira; RESENDE, Maurício; BRESSAN, Gustavo Costa; FIETTO, Juliana Lopes Rangel; SANTOS, Marcus Rebouças; SILVA, Laura Morais Nascimento; ASSAO, Viviane Sisdelli; SILVA-JÚNIOR, Abelardo; de ALMEIDA, Márcia Rogéria
Title: Feline coronavirus isolates from a part of Brazil: insights into molecular epidemiology and phylogeny inferred from the 7b gene
  • Document date: 2019_8_23
  • ID: 1s25r3o0_8
    Snippet: Sequences were aligned using MUSCLE v.3.8. 31 9 [11] . Sites with gaps were excluded. To expedite the construction of phylogenetic trees, a model of nucleotide substitution was estimated using the jModelTest program [5] . The TIM3ef+I+G substitution model was selected as the best DNA evolution model according to the AIC, AICc, and BIC criteria......
    Document: Sequences were aligned using MUSCLE v.3.8. 31 9 [11] . Sites with gaps were excluded. To expedite the construction of phylogenetic trees, a model of nucleotide substitution was estimated using the jModelTest program [5] . The TIM3ef+I+G substitution model was selected as the best DNA evolution model according to the AIC, AICc, and BIC criteria.

    Search related documents:
    Co phrase search for related documents
    • BIC criterion and nucleotide substitution model: 1, 2, 3
    • BIC criterion and phylogenetic tree: 1
    • BIC criterion and substitution model: 1, 2, 3
    • dna evolution model and evolution model: 1
    • dna evolution model and jModelTest program: 1
    • dna evolution model and substitution model: 1
    • evolution model and jModelTest program: 1
    • evolution model and nucleotide substitution: 1, 2, 3, 4, 5, 6
    • evolution model and nucleotide substitution model: 1, 2
    • evolution model and phylogenetic tree: 1, 2, 3, 4, 5, 6, 7, 8, 9
    • evolution model and substitution model: 1, 2, 3, 4, 5, 6, 7
    • gap site and phylogenetic tree: 1
    • jModelTest program and substitution model: 1
    • nucleotide substitution and phylogenetic tree: 1, 2, 3, 4, 5, 6, 7, 8, 9
    • nucleotide substitution and substitution model: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30
    • nucleotide substitution model and phylogenetic tree: 1, 2, 3, 4, 5
    • nucleotide substitution model and substitution model: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26
    • phylogenetic tree and substitution model: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14
    • phylogenetic tree construction and substitution model: 1