Selected article for: "query base and wild type"
Author: Lee, Charlie Wah Heng; Koh, Chee Wee; Chan, Yang Sun; Aw, Pauline Poh Kim; Loh, Kuan Hon; Han, Bing Ling; Thien, Pei Ling; Nai, Geraldine Yi Wen; Hibberd, Martin L.; Wong, Christopher W.; Sung, Wing-Kin
Title: Large-scale evolutionary surveillance of the 2009 H1N1 influenza A virus using resequencing arrays
  • Document date: 2010_2_25
    • ID: 1rhy8td0_12
    Snippet: We have identified five distinct types of neighbourhood hybridization intensity profile belonging to true nonmutations (wild-type), true mutations, isolated errors/ 'N's, long consecutive errors/'N's, and unknown errors/ 'N's, respectively. For each non-high-confidence query base, we determine the type of its neighbourhood hybridization signal intensity profile (NHIP) by the following criteria:.....
    Document: We have identified five distinct types of neighbourhood hybridization intensity profile belonging to true nonmutations (wild-type), true mutations, isolated errors/ 'N's, long consecutive errors/'N's, and unknown errors/ 'N's, respectively. For each non-high-confidence query base, we determine the type of its neighbourhood hybridization signal intensity profile (NHIP) by the following criteria:

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