Author: Dong, Rui; Zheng, Hui; Tian, Kun; Yau, Shek-Chung; Mao, Weiguang; Yu, Wenping; Yin, Changchuan; Yu, Chenglong; He, Rong Lucy; Yang, Jie; Yau, Stephen ST
Title: Virus Database and Online Inquiry System Based on Natural Vectors Document date: 2017_12_17
ID: 09a32vyg_13
Snippet: Our VirusDB contains all the single-segmented and multiplesegmented reference viral genomes in GenBank. The reference nucleotide sequence and the label information of Baltimore µ µ µ µ Dong et al 3 class, family, subfamily, genus, and species of each virus are included. Every viral nucleotide sequence is analyzed and converted into a unique 12-dimensional natural vector. Because the correspondence between the natural vectors and the existing .....
Document: Our VirusDB contains all the single-segmented and multiplesegmented reference viral genomes in GenBank. The reference nucleotide sequence and the label information of Baltimore µ µ µ µ Dong et al 3 class, family, subfamily, genus, and species of each virus are included. Every viral nucleotide sequence is analyzed and converted into a unique 12-dimensional natural vector. Because the correspondence between the natural vectors and the existing viral genomes is one to one, the distance between 2 viral genomes based on natural vectors successfully reflects their biological distance. 8, 10 Relative distances ensure the influence of different scopes of families or species, whereas absolute distances show little significance to the final result as the length and the scope of categories vary from one to another.
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