Author: Wassenaar, Trudy M.; Jun, Se-Ran; Robeson, Michael; Ussery, David W.
Title: Comparative genomics of hepatitis A virus, hepatitis C virus, and hepatitis E virus provides insights into the evolutionary history of Hepatovirus species Document date: 2019_11_19
ID: 3hayxyuk_18
Snippet: Codon usage tables were also calculated for representative genomes for each genotype per species, as there were only minor differences between genotypes within a species, using the Codon Usage Calculator (https ://www.biolo gicsc orp.com/tools/ Codon Usage Calcu lator ) and averaged results were plotted in net plots with Excel. The codons of overlapping coding regions in HepE were first removed for this analysis, and their effect was assessed by .....
Document: Codon usage tables were also calculated for representative genomes for each genotype per species, as there were only minor differences between genotypes within a species, using the Codon Usage Calculator (https ://www.biolo gicsc orp.com/tools/ Codon Usage Calcu lator ) and averaged results were plotted in net plots with Excel. The codons of overlapping coding regions in HepE were first removed for this analysis, and their effect was assessed by a separate analysis where they were added in both frames, which did (Xia, 2013) .
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