Author: Bahir, Iris; Fromer, Menachem; Prat, Yosef; Linial, Michal
Title: Viral adaptation to host: a proteome-based analysis of codon usage and amino acid preferences Document date: 2009_10_13
ID: 629kl04a_56
Snippet: We selected 30 organisms and 30 matched viruses (Supplementary Table S1 ) that are unique (i.e., assigned to a specific organism, Figure 2 ). Taxonomical views that have very little support (o2 proteins, o500 amino acids, or o700 codons) were eliminated. Note that the representative virus (reference strain) corresponds to tens of other viruses that are poorly annotated and thus are not selected as representatives. The mapping of a representative .....
Document: We selected 30 organisms and 30 matched viruses (Supplementary Table S1 ) that are unique (i.e., assigned to a specific organism, Figure 2 ). Taxonomical views that have very little support (o2 proteins, o500 amino acids, or o700 codons) were eliminated. Note that the representative virus (reference strain) corresponds to tens of other viruses that are poorly annotated and thus are not selected as representatives. The mapping of a representative to other viruses is based on the ViralZone mapping.
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