Selected article for: "alignment free method and sequence alignment"

Author: Dong, Rui; Zheng, Hui; Tian, Kun; Yau, Shek-Chung; Mao, Weiguang; Yu, Wenping; Yin, Changchuan; Yu, Chenglong; He, Rong Lucy; Yang, Jie; Yau, Stephen ST
Title: Virus Database and Online Inquiry System Based on Natural Vectors
  • Document date: 2017_12_17
  • ID: 09a32vyg_6
    Snippet: There are 2 kinds of methods for alignment-free genetic sequence comparison in the literature. 12 One is based on the statistics of oligomer frequencies and associated with a fixedlength segments, and the other one is based on information theory and chaos theory. In the past 10 years, alignment-free comparison has attracted much attention from researchers, and more and more methods and models have been proposed. The natural vector method is an al.....
    Document: There are 2 kinds of methods for alignment-free genetic sequence comparison in the literature. 12 One is based on the statistics of oligomer frequencies and associated with a fixedlength segments, and the other one is based on information theory and chaos theory. In the past 10 years, alignment-free comparison has attracted much attention from researchers, and more and more methods and models have been proposed. The natural vector method is an alignment-free approach to characterize the genetic sequences and could be used to classify and to predict the DNA/RNA and protein sequences with high efficiency and accuracy. 8, [10] [11] [12] [13] [14] Let S = (s ,s ,...,s )

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