Selected article for: "amino acid and sequence alignment"
Author: Zhao, Xiaoya; Li, Zhili; Zeng, Xiduo; Zhang, Guanqun; Niu, Jianqiang; Sun, Baoli; Ma, Jingyun
Title: Sequence analysis of the spike gene of Porcine epidemic diarrhea virus isolated from South China during 2011–2015
  • Document date: 2017_6_22
    • ID: 2gp1mqfw_15
    Snippet: Sequence alignment showed nucleotide (deduced amino acid) identities in the range 94.4% to 99.9% (93.8%-99.9%) among the 55 Chinese PEDV strains and identities in the range 92.4% to 99.76% (90.7%-99.5%) with the foreign reference strains reported in GenBank. Some vaccine strains including CV777, attenuated DR13, SM98, and 83P-5_100th-passaged are used in a variety of countries. The S genes of our 55 recently isolated Chinese field strains shared .....
    Document: Sequence alignment showed nucleotide (deduced amino acid) identities in the range 94.4% to 99.9% (93.8%-99.9%) among the 55 Chinese PEDV strains and identities in the range 92.4% to 99.76% (90.7%-99.5%) with the foreign reference strains reported in GenBank. Some vaccine strains including CV777, attenuated DR13, SM98, and 83P-5_100th-passaged are used in a variety of countries. The S genes of our 55 recently isolated Chinese field strains shared identity with CV777 (93.8%-95.7%), CHGD-01 (94.6.0%-98.3%), SM98 (93.3%-95.4%), attenuated DR13 (93.3%-95.6%), and 83P-5_100thpassaged (93.7%-96.0%). The deduced amino acid sequences of these strains shared identity with CV777 (93.0%-96.1%), CHGD-01 (94.1%-98.3%), SM98 (92.1%-95.3%), attenuated DR13 (92.0%-95.7%), and 83P-5_100th-passaged (92.4%-96.1%). The S genes of the 55 recently isolated Chinese field

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