Author: Pickett, Brett E.; Sadat, Eva L.; Zhang, Yun; Noronha, Jyothi M.; Squires, R. Burke; Hunt, Victoria; Liu, Mengya; Kumar, Sanjeev; Zaremba, Sam; Gu, Zhiping; Zhou, Liwei; Larson, Christopher N.; Dietrich, Jonathan; Klem, Edward B.; Scheuermann, Richard H.
Title: ViPR: an open bioinformatics database and analysis resource for virology research Document date: 2011_10_17
ID: 48ym7eti_29
Snippet: 3D structure visualization. ViPR includes the Jmol protein structure viewer application to permit the rapid exploration and visualization of virus-related structures from the PDB. We have enhanced this tool by including the ability to highlight ligands and active sites on the displayed 3D protein structure. Options to customize the general appearance of the protein structure are provided. Individual residues within the protein structure(s) for ea.....
Document: 3D structure visualization. ViPR includes the Jmol protein structure viewer application to permit the rapid exploration and visualization of virus-related structures from the PDB. We have enhanced this tool by including the ability to highlight ligands and active sites on the displayed 3D protein structure. Options to customize the general appearance of the protein structure are provided. Individual residues within the protein structure(s) for each PDB file are mapped to homologous positions from UniProt records to make comparison between different structures and the associated amino acid sequence as simple as possible. In the future, highlighting of immune epitopes and other sequence features will be supported.
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