Selected article for: "genome sequence and virus sequence"
Author: Dong, Rui; Zheng, Hui; Tian, Kun; Yau, Shek-Chung; Mao, Weiguang; Yu, Wenping; Yin, Changchuan; Yu, Chenglong; He, Rong Lucy; Yang, Jie; Yau, Stephen ST
Title: Virus Database and Online Inquiry System Based on Natural Vectors
  • Document date: 2017_12_17
    • ID: 09a32vyg_9
    Snippet: Using the natural vector representation, if a viral genome consists of a single-nucleotide sequence, known as single-segmented, then the virus will be represented by a 12-dimensional numerical vector in the database. If a viral genome contains more than one nucleotide sequence, known as multiple-segmented, then each nucleotide sequence is represented by a natural vector and this virus will be represented by multiple 12-dimensional vectors in the .....
    Document: Using the natural vector representation, if a viral genome consists of a single-nucleotide sequence, known as single-segmented, then the virus will be represented by a 12-dimensional numerical vector in the database. If a viral genome contains more than one nucleotide sequence, known as multiple-segmented, then each nucleotide sequence is represented by a natural vector and this virus will be represented by multiple 12-dimensional vectors in the database. According to the distance matrix, we find the nearest neighbor of each virus, i.e., the virus that has the smallest distance to it. We check the Baltimore, family, genus, and species labels of the virus and count it as a case of misclassification if they are not consistent.

    Search related documents:
    Co phrase search for related documents
    • distance matrix and single nucleotide: 1
    • distance matrix and single nucleotide sequence: 1
    • multiple vector and natural vector: 1
    • multiple vector and nucleotide sequence: 1, 2
    • natural vector and nucleotide sequence: 1, 2
    • natural vector and numerical vector: 1
    • nucleotide sequence and numerical vector: 1, 2
    • nucleotide sequence and single nucleotide: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25