Author: Wassenaar, Trudy M.; Jun, Se-Ran; Robeson, Michael; Ussery, David W.
Title: Comparative genomics of hepatitis A virus, hepatitis C virus, and hepatitis E virus provides insights into the evolutionary history of Hepatovirus species Document date: 2019_11_19
ID: 3hayxyuk_11
Snippet: Here, we compare the genotype groupings of all three viral species utilizing several thousand genome sequences downloaded from public databases. The phylogenetic analysis was restricted to human isolates, except for HEV for which pig/wild boar and rabbit isolates were included. Their codon usage and amino acid frequencies were compared, and viral genomes of other species were then included to provide insights toward the possible evolutionary orig.....
Document: Here, we compare the genotype groupings of all three viral species utilizing several thousand genome sequences downloaded from public databases. The phylogenetic analysis was restricted to human isolates, except for HEV for which pig/wild boar and rabbit isolates were included. Their codon usage and amino acid frequencies were compared, and viral genomes of other species were then included to provide insights toward the possible evolutionary origin of HAV.
Search related documents:
Co phrase search for related documents- amino acid and evolutionary origin: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16
- amino acid and genome sequence: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25
- amino acid and genotype grouping: 1
- amino acid and human isolate: 1, 2, 3, 4, 5, 6, 7, 8, 9
- amino acid and phylogenetic analysis: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25
- amino acid and public database: 1, 2, 3, 4, 5, 6, 7
- amino acid codon usage and codon usage: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25
- codon usage and evolutionary origin: 1, 2, 3
- codon usage and genome sequence: 1, 2, 3, 4, 5, 6, 7, 8, 9
- codon usage and phylogenetic analysis: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12
- evolutionary origin and phylogenetic analysis: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16
- genome sequence and human isolate: 1, 2, 3, 4, 5
- genome sequence and phylogenetic analysis: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25
- genome sequence and public database: 1, 2, 3, 4
- human isolate and phylogenetic analysis: 1, 2, 3, 4, 5, 6, 7, 8
- phylogenetic analysis and public database: 1, 2, 3, 4
Co phrase search for related documents, hyperlinks ordered by date