Author: Theis, Corinna; Reeder, Jens; Giegerich, Robert
Title: KnotInFrame: prediction of -1 ribosomal frameshift events Document date: 2008_9_27
ID: 4ov0j2u3_21
Snippet: (iii) In the ranking phase, the candidates passing all filters are ranked by an evaluation function based on the normalized dominance of the pseudoknot. Figure 2 gives an overview of the pipeline. Overall, KnotInFrame expects a set of sequences as input, and returns one or several predicted frameshift sites for each sequence. The predictions can then undergo comparative sequence analysis or experimental validation......
Document: (iii) In the ranking phase, the candidates passing all filters are ranked by an evaluation function based on the normalized dominance of the pseudoknot. Figure 2 gives an overview of the pipeline. Overall, KnotInFrame expects a set of sequences as input, and returns one or several predicted frameshift sites for each sequence. The predictions can then undergo comparative sequence analysis or experimental validation.
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