Author: Jiao Chen; Jiayu Shang; Jianrong Wang; Yanni Sun
Title: A binning tool to reconstruct viral haplotypes from assembled contigs Document date: 2019_7_16
ID: 2basllfv_12
Snippet: Here we present VirBin, a method designed specifically for binning contigs derived from viral quasispecies data. The input to VirBin is a set of contigs derived from assembly tools. The output includes the estimated number of haplotypes, the grouped contigs for each haplotype, and the corresponding relative abundances. Unlike many bacterial contig binning tools that require multiple samples, our method works on a single sample......
Document: Here we present VirBin, a method designed specifically for binning contigs derived from viral quasispecies data. The input to VirBin is a set of contigs derived from assembly tools. The output includes the estimated number of haplotypes, the grouped contigs for each haplotype, and the corresponding relative abundances. Unlike many bacterial contig binning tools that require multiple samples, our method works on a single sample.
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