Author: Bahir, Iris; Fromer, Menachem; Prat, Yosef; Linial, Michal
Title: Viral adaptation to host: a proteome-based analysis of codon usage and amino acid preferences Document date: 2009_10_13
ID: 629kl04a_29
Snippet: We tested whether the above phenomenon is perhaps dominated by the virus classification scheme. Human-infecting viruses are found in each of the seven classes (see Materials and methods). However, only for four of the seven classes do there exist three or more proteins derived from viruses that exclusively infect humans. Overall, all four of these human virus classes provide an almost identical codon usage profile when compared with mammals, inse.....
Document: We tested whether the above phenomenon is perhaps dominated by the virus classification scheme. Human-infecting viruses are found in each of the seven classes (see Materials and methods). However, only for four of the seven classes do there exist three or more proteins derived from viruses that exclusively infect humans. Overall, all four of these human virus classes provide an almost identical codon usage profile when compared with mammals, insects, and plants (not shown), thus precluding such reasoning.
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