Selected article for: "phylogenetic tree and RNA virus"

Author: Belshaw, Robert; de Oliveira, Tulio; Markowitz, Sidney; Rambaut, Andrew
Title: The RNA Virus Database
  • Document date: 2008_10_23
  • ID: 4txctk7k_4
    Snippet: Some of the data and tools on the RNA Virus Database can be found elsewhere, but not all of them can, e.g. NCBI's Genome site provides genomic overviews of virus species and pairwise alignments of other isolates to the reference sequence, but it does not provide multiple alignments or complete translated genomes as we do. Similarly, its general Entrez site provides pair-wise alignments of the query sequence and similar sequences in the *To whom c.....
    Document: Some of the data and tools on the RNA Virus Database can be found elsewhere, but not all of them can, e.g. NCBI's Genome site provides genomic overviews of virus species and pairwise alignments of other isolates to the reference sequence, but it does not provide multiple alignments or complete translated genomes as we do. Similarly, its general Entrez site provides pair-wise alignments of the query sequence and similar sequences in the *To whom correspondence should be addressed. Tel: +44 1865 281997; Fax: +44 1865 310447; Email: robert.belshaw@zoo.ox.ac.uk ß 2008 The Author(s) This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/ by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. database, plus a phylogenetic tree calculated from those distances; however, no multiple alignment is built. We also corrected the (few) errors in the GenBank entries, and our database records features such as RNA editing (10) that make genome translation problematic.

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