Author: Drexler, Jan Felix; Corman, Victor Max; Müller, Marcel Alexander; Maganga, Gael Darren; Vallo, Peter; Binger, Tabea; Gloza-Rausch, Florian; Rasche, Andrea; Yordanov, Stoian; Seebens, Antje; Oppong, Samuel; Sarkodie, Yaw Adu; Pongombo, Célestin; Lukashev, Alexander N.; Schmidt-Chanasit, Jonas; Stöcker, Andreas; Carneiro, Aroldo José Borges; Erbar, Stephanie; Maisner, Andrea; Fronhoffs, Florian; Buettner, Reinhard; Kalko, Elisabeth K.V.; Kruppa, Thomas; Franke, Carlos Roberto; Kallies, René; Yandoko, Emmanuel R.N.; Herrler, Georg; Reusken, Chantal; Hassanin, Alexandre; Krüger, Detlev H.; Matthee, Sonja; Ulrich, Rainer G.; Leroy, Eric M.; Drosten, Christian
Title: Bats host major mammalian paramyxoviruses Document date: 2012_4_24
ID: yw028ohl_38
Snippet: Hypothesis testing was done in Bayestraits 40 . This analysis was based on the ML phylogenetic tree shown in Supplementary Fig. S1 , including its 1,000 bootstrapped replicas. ML-based reconstructions of trait changes were calculated for each of the 1,000 replicas in Bayestraits, and the resulting median and mean values were listed in Excel. For hypothesis testing, the whole analysis was repeated under different restrictions that either synchroni.....
Document: Hypothesis testing was done in Bayestraits 40 . This analysis was based on the ML phylogenetic tree shown in Supplementary Fig. S1 , including its 1,000 bootstrapped replicas. ML-based reconstructions of trait changes were calculated for each of the 1,000 replicas in Bayestraits, and the resulting median and mean values were listed in Excel. For hypothesis testing, the whole analysis was repeated under different restrictions that either synchronised the substitution rate assumptions of two different trait change processes, or that assumed defined common ancestor nodes within the tree to be fossilised to particular hosts. For each analysis, the median and mean log likelihoods were recorded. Relative model likelihoods of alternative hypotheses were compared by subtracting the respective median log likelihoods and linearising them.
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