Author: Alquezar-Planas, David E.; Mourier, Tobias; Bruhn, Christian A. W.; Hansen, Anders J.; Vitcetz, Sarah Nathalie; Mørk, Søren; Gorodkin, Jan; Nielsen, Hanne Abel; Guo, Yan; Sethuraman, Anand; Paxinos, Ellen E.; Shan, Tongling; Delwart, Eric L.; Nielsen, Lars P.
Title: Discovery of a divergent HPIV4 from respiratory secretions using second and third generation metagenomic sequencing Document date: 2013_9_3
ID: t4215imq_2
Snippet: In addition to the analysis of sequence reads, contigs were also generated from each sample and classified using BLASTn and BLASTx expectation (E) scores from searches against the entire GenBank, with the highest scoring hit used to assign taxonomy. The assembly of filtered reads generated several contigs, however, few were taxonomically identified as viral (Supplementary Table S3 )......
Document: In addition to the analysis of sequence reads, contigs were also generated from each sample and classified using BLASTn and BLASTx expectation (E) scores from searches against the entire GenBank, with the highest scoring hit used to assign taxonomy. The assembly of filtered reads generated several contigs, however, few were taxonomically identified as viral (Supplementary Table S3 ).
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