Selected article for: "high degree and protein sequence"

Author: Kshirsagar, Meghana; Carbonell, Jaime; Klein-Seetharaman, Judith
Title: Multitask learning for host–pathogen protein interactions
  • Document date: 2013_7_1
  • ID: sdgt2ms5_75
    Snippet: We found that the feature weights vary greatly across models-the cosine similarity ranges between 0.1 and 0.13. We also analyzed which features had the highest absolute weight. We found that the node-degree feature (computed using the human PPI graph) has a high positive weight across all tasks. Gene expression features have large negative weights across all tasks. In general, the GO and protein sequence-based n-gram features have different weigh.....
    Document: We found that the feature weights vary greatly across models-the cosine similarity ranges between 0.1 and 0.13. We also analyzed which features had the highest absolute weight. We found that the node-degree feature (computed using the human PPI graph) has a high positive weight across all tasks. Gene expression features have large negative weights across all tasks. In general, the GO and protein sequence-based n-gram features have different weights across tasks.

    Search related documents:
    Co phrase search for related documents
    • cosine similarity and gene expression: 1, 2, 3
    • different weight and gene expression: 1
    • different weight and negative weight: 1, 2, 3, 4
    • gene expression and greatly vary: 1
    • gene expression and human PPI graph: 1
    • gene expression and human PPI graph compute: 1
    • gene expression and negative weight: 1
    • gene expression and node degree: 1
    • human PPI graph and node degree: 1, 2
    • human PPI graph compute and node degree: 1
    • large negative weight and negative weight: 1