Selected article for: "Neighbor Joining method and phylogenetic tree"
Author: Mohamed, Fakry F.; Ktob, Gamelat K.F.; Ismaeil, Mohamed E.A.; Ali, Ahmed A.H.; Goyal, Sagar M.
Title: Phylogeny of bovine norovirus in Egypt based on VP2 gene
  • Document date: 2018_4_13
    • ID: rah5p1y4_15
    Snippet: The study sequences had the accession numbers of MF784575 and MF784576 in GenBank. Using the MEGA 6 software [19] , nucleotide (nt) sequences of BNoV-VP2 were comparatively aligned to reference strains using the Clustal W option. The phylogenetic tree was constructed using the neighbor-joining statistical method (1.000 bootstrap replicates). The identities of nt and aa were calculated using the pdistance method. The aa were deduced from BNoV-VP2 .....
    Document: The study sequences had the accession numbers of MF784575 and MF784576 in GenBank. Using the MEGA 6 software [19] , nucleotide (nt) sequences of BNoV-VP2 were comparatively aligned to reference strains using the Clustal W option. The phylogenetic tree was constructed using the neighbor-joining statistical method (1.000 bootstrap replicates). The identities of nt and aa were calculated using the pdistance method. The aa were deduced from BNoV-VP2 nt sequences and analyzed using the DNASTAR Lasergene 7.2 software [20] .

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