Author: Yu, Chien-Hung; Noteborn, Mathieu H.; Pleij, Cornelis W. A.; Olsthoorn, René C. L.
Title: Stem–loop structures can effectively substitute for an RNA pseudoknot in -1 ribosomal frameshifting Document date: 2011_7_29
ID: wifs97yy_4
Snippet: Although a hairpin is considered to be a less efficient frameshift-inducing secondary structure than a pseudoknot, some viruses like Human immunodeficiency virus (HIV) (16) , Human T-lymphotropic virus type-2 (HTLV-2) (17) and Cocksfoot mottle virus (CfMV) (18) make use of a simple hairpin to stimulate substantial levels of frameshifting. In addition, frameshifting in the prokaryotic dnaX gene requires, next to an upstream enhancer, the presence .....
Document: Although a hairpin is considered to be a less efficient frameshift-inducing secondary structure than a pseudoknot, some viruses like Human immunodeficiency virus (HIV) (16) , Human T-lymphotropic virus type-2 (HTLV-2) (17) and Cocksfoot mottle virus (CfMV) (18) make use of a simple hairpin to stimulate substantial levels of frameshifting. In addition, frameshifting in the prokaryotic dnaX gene requires, next to an upstream enhancer, the presence of a hairpin as well (19) . A few studies have investigated a correlation between hairpin stability and frameshift efficiency of natural shifty hairpins (19, 20) . Nonetheless, certain studies have shown that a hairpin composed of the same base pairs as a frameshifter pseudoknot is not very efficient in inducing frameshifting in mammalian cells and lysates (21) (22) (23) but is in other systems (24) .
Search related documents:
Co phrase search for related documents- base pair and frameshift induce: 1
- base pair and hairpin stability: 1, 2, 3, 4, 5, 6
- base pair and human immunodeficiency: 1
- certain study and human immunodeficiency: 1
- certain study and human immunodeficiency virus: 1
- cfmv mottle virus and Cocksfoot cfmv mottle virus: 1
- frameshift efficiency and hairpin presence: 1
- frameshift efficiency and hairpin stability: 1, 2, 3, 4, 5
- frameshift efficiency and HIV human immunodeficiency virus: 1, 2, 3, 4, 5, 6, 7, 8, 9
- frameshift efficiency and human immunodeficiency: 1, 2, 3, 4, 5, 6, 7, 8, 9
- frameshift efficiency and human immunodeficiency virus: 1, 2, 3, 4, 5, 6, 7, 8, 9
- frameshifter pseudoknot and hairpin stability: 1
- hairpin stability and human immunodeficiency: 1
- hairpin stability and human immunodeficiency virus: 1
- HIV human immunodeficiency virus and human immunodeficiency: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25
- HIV human immunodeficiency virus and human immunodeficiency virus: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25
Co phrase search for related documents, hyperlinks ordered by date