Selected article for: "analysis effect and linear discriminant LEfSe analysis effect size"
Title: RESEARCH COMMUNICATIONS OF THE 28th ECVIM-CA CONGRESS
  • Document date: 2018_12_19
    • ID: r79h9yzz_718
    Snippet: Fecal samples were obtained from 30 cats with histologically confirmed CE and 42 healthy control cats. Amplification and sequencing of the V4 variable region of the 16S rRNA gene were performed utilizing the Illumina Sequencing (Illumina MiSeq) platform. The software Quantitative Insights Into Microbial Ecology (QIIME v2.0) was used for data processing and analysis. Differences in the species richness between groups were calculated using a Mannâ€.....
    Document: Fecal samples were obtained from 30 cats with histologically confirmed CE and 42 healthy control cats. Amplification and sequencing of the V4 variable region of the 16S rRNA gene were performed utilizing the Illumina Sequencing (Illumina MiSeq) platform. The software Quantitative Insights Into Microbial Ecology (QIIME v2.0) was used for data processing and analysis. Differences in the species richness between groups were calculated using a Mann‐Whitney U test. Differences in microbial communities between groups were evaluated with the phylogeny based unweighted UniFrac distance metric and statistics were performed with the Analysis of Similarities (ANOSIM). Linear discriminant analysis effect size (LEfSe) was utilized to identify bacterial populations associated with CE.

    Search related documents:
    Co phrase search for related documents
    • 16S rRNA gene and bacterial population: 1
    • 16S rRNA gene and discriminant analysis effect: 1
    • 16S rRNA gene and discriminant analysis effect size: 1
    • 16S rRNA gene and fecal sample: 1
    • 16S rRNA gene and group microbial community: 1
    • 16S rRNA gene and group richness: 1
    • 16S rRNA gene and LEfSe discriminant analysis effect size: 1
    • 16S rRNA gene and linear LEfSe discriminant analysis effect size: 1
    • 16S rRNA gene and microbial community: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26
    • 16S rRNA gene and rRNA gene: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78
    • 16S rRNA gene and sequencing amplification: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10
    • 16S rRNA gene and UniFrac distance: 1, 2, 3, 4
    • 16S rRNA gene and unweighted UniFrac distance: 1, 2, 3
    • 16S rRNA gene and variable region: 1
    • analysis effect and discriminant analysis effect: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10
    • analysis effect and discriminant analysis effect size: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10
    • analysis effect and fecal sample: 1
    • analysis effect and group richness: 1
    • analysis effect and LEfSe discriminant analysis effect size: 1, 2, 3, 4, 5, 6