Selected article for: "complete genome sequencing and genome sequencing"
Author: Mohamed, Fakry F.; Ktob, Gamelat K.F.; Ismaeil, Mohamed E.A.; Ali, Ahmed A.H.; Goyal, Sagar M.
Title: Phylogeny of bovine norovirus in Egypt based on VP2 gene
  • Document date: 2018_4_13
    • ID: rah5p1y4_29
    Snippet: To address BNoV-VP2 molecularly, representative strains from GenBank (n = 23) were used to construct a neighbor-joining phylogenetic tree (Fig. 2) . BNoV strains were phylogenetically-distinct from human norovirus (HuNoV) strains, excluding the possibility of interspecies transmission. Although being classified as BNoV-GIII.2, study strains (41FR and 42FR) were separated from each other. Studies on HuNoVs in Egypt suggested that ORF3 (VP2) follow.....
    Document: To address BNoV-VP2 molecularly, representative strains from GenBank (n = 23) were used to construct a neighbor-joining phylogenetic tree (Fig. 2) . BNoV strains were phylogenetically-distinct from human norovirus (HuNoV) strains, excluding the possibility of interspecies transmission. Although being classified as BNoV-GIII.2, study strains (41FR and 42FR) were separated from each other. Studies on HuNoVs in Egypt suggested that ORF3 (VP2) followed ORF2 (VP1) in its genetic and phylogenetic characters. However, due to the slightly different topologies between ORF2 and ORF3, BNoV-VP2 may have distinct evolutionary strategies [24] . Interestingly, the 41FR was related to recombinant GIII.P1/GIII.2 strains (BV416/Belgium and Thirsk10/UK), raising questions about the presence of intra-genotypic recombinations. We are planning for complete genome sequencing of 41FR strain to detect possible recombination breakpoints.

    Search related documents:
    Co phrase search for related documents
    • evolutionary strategy and genome sequencing: 1, 2
    • genome sequencing and phylogenetic tree: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25
    • genome sequencing and representative strain: 1, 2, 3, 4
    • phylogenetic tree and recombination breakpoint: 1, 2
    • phylogenetic tree and representative strain: 1, 2