Selected article for: "maximum likelihood and phylogenetic tree"
Author: Zhang, Xiao-Ai; Lu, Qing-Bin; Wo, Ying; Zhao, Jin; Huang, Dou-Dou; Guo, Chen-Tao; Xu, Hong-Mei; Liu, En-Mei; Liu, Wei; Cao, Wu-Chun
Title: Prevalence and genetic characteristics of Saffold cardiovirus in China from 2009 to 2012
  • Document date: 2015_1_9
    • ID: pwlbrxn3_8
    Snippet: SAFV strains accession numbers. The sequences obtained from the study were submitted to NCBI with the GenBank Accession Numbers KJ944637-KJ944718. The genomic sequences were assembled using Lasergene's DNA SeqMan software (version 7.1.0, DNA Star Inc. Madison, WI, USA). The MEGA program (version 6.0, Sudhir Kumar, Arizona State University) was used for alignments and phylogenetic tree construction by maximum likelihood method using 1000 bootstrap.....
    Document: SAFV strains accession numbers. The sequences obtained from the study were submitted to NCBI with the GenBank Accession Numbers KJ944637-KJ944718. The genomic sequences were assembled using Lasergene's DNA SeqMan software (version 7.1.0, DNA Star Inc. Madison, WI, USA). The MEGA program (version 6.0, Sudhir Kumar, Arizona State University) was used for alignments and phylogenetic tree construction by maximum likelihood method using 1000 bootstrap pseudo replicates. Nucleotide identities among strains were calculated using BioEdit (version 7.13, www.mbio.ncsu.edu/bioedit/bioedit.html).

    Search related documents:
    Co phrase search for related documents
    • accession number and likelihood method: 1
    • accession number and maximum likelihood method: 1
    • accession number and mega program: 1
    • accession number and nucleotide identity: 1, 2, 3, 4, 5, 6, 7
    • accession number and strain nucleotide identity: 1
    • DNA SeqMan software and SeqMan software: 1
    • genomic sequence and mega program: 1
    • genomic sequence and nucleotide identity: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15
    • genomic sequence and phylogenetic tree construction: 1, 2
    • genomic sequence and strain nucleotide identity: 1
    • genomic sequence and tree construction: 1, 2
    • likelihood method and maximum likelihood method: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25
    • likelihood method and mega program: 1
    • likelihood method and nucleotide identity: 1, 2, 3
    • likelihood method and phylogenetic tree construction: 1
    • likelihood method and study obtain: 1
    • likelihood method and tree construction: 1
    • maximum likelihood method and mega program: 1
    • maximum likelihood method and nucleotide identity: 1, 2, 3