Author: Sneha Rath; Eliza Prangley; Jesse Donovan; Kaitlin Demarest; Yigal Meir; Ned Wingreen; Alexei Korennykh
Title: Concerted 2-5A-Mediated mRNA Decay and Transcription Reprogram Protein Synthesis in dsRNA Response Document date: 2018_12_4
ID: ng5c7xai_41
Snippet: Log 2 abundance vs input Activity of purified ribosomes in ribosome-free RRL k (min -1 ) T 1/2 (min) Table S1 . RNAs depends primarily on their GC content, as illustrated by the graph. The GC can be used to calculate "28S rRNA-equivalent mRNA length" (REML), defined as mRNA length that decays with the same rate as 28S rRNA. Application of REML for calculation of mRNA decay in cell extracts is described in Methods. The data were obtained from RNA-.....
Document: Log 2 abundance vs input Activity of purified ribosomes in ribosome-free RRL k (min -1 ) T 1/2 (min) Table S1 . RNAs depends primarily on their GC content, as illustrated by the graph. The GC can be used to calculate "28S rRNA-equivalent mRNA length" (REML), defined as mRNA length that decays with the same rate as 28S rRNA. Application of REML for calculation of mRNA decay in cell extracts is described in Methods. The data were obtained from RNA-seq GEO dataset GSE75530 . The copyright holder for this preprint (which was not peer-reviewed) is the author/funder. It . https://doi.org/10.1101/484675 doi: bioRxiv preprint
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