Author: Xianding Deng; Wei Gu; Scot Federman; Louis Du Plessis; Oliver Pybus; Nuno Faria; Candace Wang; Guixia Yu; Chao-Yang Pan; Hugo Guevara; Alicia Sotomayor-Gonzalez; Kelsey Zorn; Allan Gopez; Venice Servellita; Elaine Hsu; Steve Miller; Trevor Bedford; Alexander Greninger; Pavitra Roychoudhury; Michael Famulare; Helen Y Chu; Jay Shendure; Lea Starita; Catie Anderson; Karthik Gangavarapu; Mark Zeller; Emily Spencer; Kristian Andersen; Duncan MacCannell; Suxiang Tong; Gregory Armstrong; Clinton Paden; Yan Li; Ying Zhang; Scott Morrow; Matthew Willis; Bela Matyas; Sundari Mase; Olivia Kasirye; Maggie Park; Curtis Chan; Alexander Yu; Shua Chai; Elsa Villarino; Brandon Bonin; Debra Wadford; Charles Y Chiu
Title: A Genomic Survey of SARS-CoV-2 Reveals Multiple Introductions into Northern California without a Predominant Lineage Document date: 2020_3_30
ID: cbc98t7x_3
Snippet: Genomic epidemiology of emerging viruses has proven to be a useful tool for outbreak investigation and for tracking virus evolution and spread (6, 7) . During the Ebola virus disease epidemic of 2013-2016 in West Africa, genomic analyses established that the outbreak had a single zoonotic origin (8) , that two major viral lineages were circulating (9) , and that sexual transmission played a role in maintaining some transmission chains (10) . Vira.....
Document: Genomic epidemiology of emerging viruses has proven to be a useful tool for outbreak investigation and for tracking virus evolution and spread (6, 7) . During the Ebola virus disease epidemic of 2013-2016 in West Africa, genomic analyses established that the outbreak had a single zoonotic origin (8) , that two major viral lineages were circulating (9) , and that sexual transmission played a role in maintaining some transmission chains (10) . Viral genome sequencing also uncovered the route that Zika virus traveled from northern Brazil (11) to other regions, including Central America and Mexico (12) and the Caribbean and United States (13) . However, real-time genomic epidemiology data of COVID-19 to inform public health interventions in California have been lacking.
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