Selected article for: "docking simulation and molecular docking simulation"

Author: Suárez, Margarita; Makowski, Kamil; Lemos, Reinier; Almagro, Luis; Rodríguez, Hortensia; Herranz, María Ángeles; Molero, Dolores; Ortiz, Orlando; Maroto, Enrique; Albericio, Fernando; Murata, Yasujiro; Martín, Nazario
Title: An Androsterone‐H(2)@C(60) hybrid: Synthesis, Properties and Molecular Docking Simulations with SARS‐Cov‐2
  • Cord-id: 1orsx352
  • Document date: 2021_2_4
  • ID: 1orsx352
    Snippet: We report the synthesis and characterization of a fullerene‐steroid hybrid that contains H(2)@C(60) and a dehydroepiandrosterone moiety synthesized by a cyclopropanation reaction with 76 % yield. Theoretical calculations at the DFT‐D3(BJ)/PBE 6‐311G(d,p) level predict the most stable conformation and that the saturation of a double bond is the main factor causing the upfield shielding of the signal appearing at −3.13 ppm, which corresponds to the H(2) located inside the fullerene cage. R
    Document: We report the synthesis and characterization of a fullerene‐steroid hybrid that contains H(2)@C(60) and a dehydroepiandrosterone moiety synthesized by a cyclopropanation reaction with 76 % yield. Theoretical calculations at the DFT‐D3(BJ)/PBE 6‐311G(d,p) level predict the most stable conformation and that the saturation of a double bond is the main factor causing the upfield shielding of the signal appearing at −3.13 ppm, which corresponds to the H(2) located inside the fullerene cage. Relevant stereoelectronic parameters were also investigated and reinforce the idea that electronic interactions must be considered to develop studies on chemical‐biological interactions. A molecular docking simulation predicted that the binding energy values for the protease‐hybrid complexes were −9.9 kcal/mol and −13.5 kcal/mol for PL(pro) and 3CL(pro) respectively, indicating the potential use of the synthesized steroid‐H(2)@C(60) as anti‐SARS‐Cov‐2 agent.

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