Author: Haley R. Harrington; Matthew H. Zimmer; Laura M. Chamness; Veronica Nash; Wesley D. Penn; Thomas F. Miller; Suchetana Mukhopadhyay; Jonathan P. Schlebach
Title: Cotranslational Folding Stimulates Programmed Ribosomal Frameshifting in the Alphavirus Structural Polyprotein Document date: 2019_10_2
ID: 4ju3x2bf_26
Snippet: The energetics associated with the translocon-mediated membrane integration of the nascent structural polyprotein were carried out using the ΔG predictor (http://dgpred.cbr.su.se/). 34 These predictions are generated using a window scan function that sums depth-dependent free energies associated with the transfer of amino acids from the translocon to the ER membrane. 33 Full sequence scans of varying window size were used to compare the predicte.....
Document: The energetics associated with the translocon-mediated membrane integration of the nascent structural polyprotein were carried out using the ΔG predictor (http://dgpred.cbr.su.se/). 34 These predictions are generated using a window scan function that sums depth-dependent free energies associated with the transfer of amino acids from the translocon to the ER membrane. 33 Full sequence scans of varying window size were used to compare the predicted transfer free energies associated with each segment within the polyprotein in order to identify the segments that are most likely to undergo translocon-mediated membrane integration.
Search related documents:
Co phrase search for related documents- amino acid and free energy: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40
- amino acid and δg predictor: 1
- amino acid and membrane integration: 1, 2, 3
- amino acid and sequence scan: 1, 2
- amino acid and structural polyprotein: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
- ER membrane and δg predictor: 1
- ER membrane and membrane integration: 1, 2, 3, 4, 5, 6, 7, 8
- ER membrane and nascent structural polyprotein: 1
- ER membrane and structural polyprotein: 1, 2, 3, 4
- free energy and membrane integration: 1
- δg predictor and membrane integration: 1, 2
- δg predictor and sequence scan: 1
- δg predictor and structural polyprotein: 1, 2, 3
- membrane integration and nascent structural polyprotein: 1, 2
- membrane integration and nascent structural polyprotein membrane integration: 1
- membrane integration and structural polyprotein: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10
- nascent structural polyprotein and structural polyprotein: 1, 2, 3
- nascent structural polyprotein membrane integration and structural polyprotein: 1
Co phrase search for related documents, hyperlinks ordered by date