Author: Susmita Roy
Title: Dynamical asymmetry exposes 2019-nCoV prefusion spike Document date: 2020_4_22
ID: 29n9tsk9_19
Snippet: Coarse-grained structure-based simulations have been performed for full-length trimetric SARS-CoV-2 spike protein. The structure-based Hamiltonians for different simulations were derived after processing the recent Cryo-EM structure (pdb:6vsb) thorough the Swiss Model to complete missing loops present in the structure (7, 16) . This generates a homo-trimeric SARS-CoV-2 spike where this initial structure has important components in terms of intra .....
Document: Coarse-grained structure-based simulations have been performed for full-length trimetric SARS-CoV-2 spike protein. The structure-based Hamiltonians for different simulations were derived after processing the recent Cryo-EM structure (pdb:6vsb) thorough the Swiss Model to complete missing loops present in the structure (7, 16) . This generates a homo-trimeric SARS-CoV-2 spike where this initial structure has important components in terms of intra and inter-chain contacts (interaction) leading to an 'S1-head-up' and an 'S1-head-down' conformation for each protomer. In this prevalent trimeric variant, only one monomer adopts 'S1-head-up' and the same author/funder. All rights reserved. No reuse allowed without permission.
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