Selected article for: "population distribution and state population"
Author: Susmita Roy
Title: Dynamical asymmetry exposes 2019-nCoV prefusion spike
  • Document date: 2020_4_22
    • ID: 29n9tsk9_6
    Snippet: The copyright holder for this preprint (which was not peer-reviewed) is the . https://doi.org/10.1101/2020.04.20.052290 doi: bioRxiv preprint Fig. 3 .Conformational transition of SARS-CoV-2 spike protein in its prefused state. A. The fraction of native contact (Q) dynamics counting inter-chains contact-pairs formed in the S1head-up state and the S1-head-down state. B. A two-dimensional free energy landscape of conformational transition as a funct.....
    Document: The copyright holder for this preprint (which was not peer-reviewed) is the . https://doi.org/10.1101/2020.04.20.052290 doi: bioRxiv preprint Fig. 3 .Conformational transition of SARS-CoV-2 spike protein in its prefused state. A. The fraction of native contact (Q) dynamics counting inter-chains contact-pairs formed in the S1head-up state and the S1-head-down state. B. A two-dimensional free energy landscape of conformational transition as a function of inter-chain contacts supporting S1-head-down (x-axis) and S1-head-up state (y-axis) explores all possible conformations. C. The representative structure corresponding to each minimum of the free energy landscape is designated as follows: (i) 3up, (ii) 2up-1down, (iii) 1up-2down, and (iv) 3down state (as shown in the one-dimension population distribution plot).

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