Selected article for: "secondary structure and structural similarity"
Author: Riccardo Delli ponti; Alexandros Armaos; Stefanie Marti; Gian Gaetano Tartaglia
Title: A method for RNA structure prediction shows evidence for structure in lncRNAs
  • Document date: 2018_4_16
    • ID: jb447ndz_25
    Snippet: The copyright holder for this preprint (which was not peer-reviewed) is the . https://doi.org/10.1101/284869 doi: bioRxiv preprint Structural similarities of human RepA against all mouse lincRNAs using doublestranded nucleotides (nucleotide with CROSS score < 0 are set to 0). Human RepA is identified as the best match (colored in red), which highlights the importance of the structural content for the regulatory domains of the lncRNAs. (C) Seconda.....
    Document: The copyright holder for this preprint (which was not peer-reviewed) is the . https://doi.org/10.1101/284869 doi: bioRxiv preprint Structural similarities of human RepA against all mouse lincRNAs using doublestranded nucleotides (nucleotide with CROSS score < 0 are set to 0). Human RepA is identified as the best match (colored in red), which highlights the importance of the structural content for the regulatory domains of the lncRNAs. (C) Secondary structure profile of human RepA, obtained as optimal path with OBE-DTW, compared with the best match in mouse lincRNAs (Mirg; ENSMUSG00000097391). The two secondary structure profiles show a strong a correlation (0.92). Percentage of sequence similarity Structural distance Percentage of sequence similarity Sequence CROSS score correlation=0.92 Percentage of sequence similarity

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