Selected article for: "binding site and free energy"

Author: M. Shaminur Rahman; M. Nazmul Hoque; M. Rafiul Islam; Salma Akter; A. S. M. Rubayet-Ul-Alam; Mohammad Anwar Siddique; Otun Saha; Md. Mizanur Rahaman; Munawar Sultana; M. Anwar Hossain
Title: Epitope-based chimeric peptide vaccine design against S, M and E proteins of SARS-CoV-2 etiologic agent of global pandemic COVID-19: an in silico approach
  • Document date: 2020_3_31
  • ID: 0yqyclxk_20
    Snippet: The evaluation of minimum free energy for 25 structures of chimeric mRNA, the 379 optimized sequences carried out by the 'Mfold'server. The results showed that Δ G of the best 380 predicted structure for the optimized construct was Δ G = -386.50 kcal/mol. The first nucleotides 381 at 5' did not have a long stable hairpin or pseudoknot. Therefore, the binding of ribosomes to the 382 translation initiation site, and the following translation proc.....
    Document: The evaluation of minimum free energy for 25 structures of chimeric mRNA, the 379 optimized sequences carried out by the 'Mfold'server. The results showed that Δ G of the best 380 predicted structure for the optimized construct was Δ G = -386.50 kcal/mol. The first nucleotides 381 at 5' did not have a long stable hairpin or pseudoknot. Therefore, the binding of ribosomes to the 382 translation initiation site, and the following translation process can be readily accomplished in 383 the target host. These outcomes were in the agreement with data obtained from the 384 'RNAfold'web server ( Fig. 9 d,e) where the free energy was -391.37 kcal/mol. 385 386

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