Author: Wanda J. Lyon; Zachary K. Smith; Brian Grier; James Baldwin; Clarise R. Starr
Title: Evaluating an Upper Respiratory Disease Panel on the Portable MinION Sequencer Document date: 2018_10_5
ID: 3begdfx2_28
Snippet: The total base yield was 44.85 million and a quality score was centered on 9 (S1). The read length was from 2000 bp and 24050 reads with the majority of the fragments at approximately 5000 bp. H. influenzae was correctly identified by the Metrichor's WIMP ( Figure 4A ) and the read alignment was verified with Bracken and visualization of the output was accomplished with Krona ( Figure 4B ). Coronavirus 229E was also successful identified using Me.....
Document: The total base yield was 44.85 million and a quality score was centered on 9 (S1). The read length was from 2000 bp and 24050 reads with the majority of the fragments at approximately 5000 bp. H. influenzae was correctly identified by the Metrichor's WIMP ( Figure 4A ) and the read alignment was verified with Bracken and visualization of the output was accomplished with Krona ( Figure 4B ). Coronavirus 229E was also successful identified using Metrichor's WIMP application (S2). The coverage was calculated for both the H. influenzae and Coronavirus 229E with the formula C=LN/G, where C = coverage, L = average sequence read length, average All rights reserved. No reuse allowed without permission.
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