Plant isoquinoline alkaloids as potential neurodrugs: A comparative study of the effects of benzo[c]phenanthridine and berberine based compounds on β-amyloid aggregation

Marasco, Daniela; Vicidomini, Caterina; Krupa, Pawel; Cioffi, Federica; Quoc Huy, Pham Dinh; Suan Li, Mai; Florio, Daniele; Broersen, Kerensa; De Pandis, Maria Francesca; Roviello, Giovanni N.

Herein we present a comparative study of the effects of isoquinoline alkaloids belonging to benzo [c]phenanthridine and berberine families on β-amyloid aggregation. Results obtained using a Thioflavine T (ThT) fluorescence assay and circular dichroism (CD) spectroscopy suggested that the benzo [c]phenanthridine nucleus, present in both sanguinarine and chelerythrine molecules, was directly involved in an inhibitory effect of Aβ(1–42) aggregation. Conversely, coralyne, that contains the isomeric berberine nucleus, significantly increased propensity for Aβ(1–42) to aggregate. Surface Plasmon Resonance (SPR) experiments provided quantitative estimation of these interactions: coralyne bound to Aβ(1–42) with an affinity (K(D) = 11.6 μM) higher than benzo [c]phenanthridines. Molecular docking studies confirmed that all three compounds are able to recognize Aβ(1–42) in different aggregation forms suggesting their effective capacity to modulate self-recognition mechanism. Molecular dynamics simulations indicated that coralyne increased the β-content of Aβ(1–42), in early stages of aggregation, consistently with fluorescence-based promotion of self-recognition mechanism by this alkaloid. At the same time, sanguinarine seemed to determine an increase of helical conformation corroborating its ability to delay aggregation as experimentally proved in vitro. Investigated compounds demonstrated to interfere with aggregation of Aβ(1–42) applying as starting leads in neurodegenerative diseases.