Selected article for: "International license and raw dna"
Author: Humberto J Debat
Title: Expanding the size limit of RNA viruses: Evidence of a novel divergent nidovirus in California sea hare, with a ~35.9 kb virus genome
  • Document date: 2018_4_24
    • ID: n78fga3r_37
    Snippet: In order to assess the potential RNA virus landscape of A. californica, every available RNA AplCal3.0 (GenBank accession number GCF_000002075.1) was explored by TBLASTN searches (E-value >1e-1) using as query the predicted protein products of AcNV, in order to . CC-BY-NC-ND 4.0 International license is made available under a The copyright holder for this preprint (which was not peer-reviewed) is the author/funder. It . https://doi.org/10.1101/307.....
    Document: In order to assess the potential RNA virus landscape of A. californica, every available RNA AplCal3.0 (GenBank accession number GCF_000002075.1) was explored by TBLASTN searches (E-value >1e-1) using as query the predicted protein products of AcNV, in order to . CC-BY-NC-ND 4.0 International license is made available under a The copyright holder for this preprint (which was not peer-reviewed) is the author/funder. It . https://doi.org/10.1101/307678 doi: bioRxiv preprint identify potential endogenous viral elements EVEs (Katzourakis & Gifford, 2010) with similarity with AcNV. In addition, raw DNA reads used to generate the A. californica genome (Bioproject PRJNA13635) were explored in detail by MEGABLAST to rule out potential unassembled EVEs missed in AplCal3.0 genome assembly.

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