Author: Clancy, Damian
Title: Generality of endemic prevalence formulae Cord-id: gmpsniqt Document date: 2015_8_29
ID: gmpsniqt
Snippet: In simple infection models, the susceptible proportion s(*) in endemic equilibrium is related to the basic reproduction number R(0) by [Formula: see text]. We investigate the extent to which this relationship remains valid under more realistic modelling assumptions. In particular, we relax the biologically implausible assumptions that individuals’ lifetimes and infectious periods follow exponential distributions; allow a general recruitment process; allow for multiple stages of infection; and
Document: In simple infection models, the susceptible proportion s(*) in endemic equilibrium is related to the basic reproduction number R(0) by [Formula: see text]. We investigate the extent to which this relationship remains valid under more realistic modelling assumptions. In particular, we relax the biologically implausible assumptions that individuals’ lifetimes and infectious periods follow exponential distributions; allow a general recruitment process; allow for multiple stages of infection; and consider extension to a multigroup model in which the groups may represent, for instance, spatial heterogeneity, or the existence of super-spreaders. For a homogeneous population, we find that: (i) the susceptible proportion is [Formula: see text] where [Formula: see text] is a modified reproduction number, equal to R(0) only in certain circumstances; (ii) the proportions of the population in each stage of infection are proportional to the expected time spent by an infected individual in that stage before recovery or death. We demonstrate robustness of the formula [Formula: see text] for many human infections by noting conditions under which [Formula: see text] is approximately equal to R(0), while pointing out other circumstances under which this approximation fails. For heterogeneous populations, the formula [Formula: see text] does not hold in general, but we are able to exhibit symmetry conditions under which it is valid.
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