Author: S. Willis; J. Masel
Title: Gene birth contributes to structural disorder encoded by overlapping genes Document date: 2017_12_6
ID: 9w2wjiik_37
Snippet: We used the lmer and gls functions contained in the nlme and lme4 R packages to generate the linear mixed models. The main model used to calculate the relative effect sizes used frameshifted non-ORF nonoverlapping genes as the non-genic control. In this model, frame, gene designation, species, and homology group terms were retained in the model with p = 5×10 −20 , 1×10 −6 , 9×10 −19 , and 2×10 −3 respectively. All four terms were also.....
Document: We used the lmer and gls functions contained in the nlme and lme4 R packages to generate the linear mixed models. The main model used to calculate the relative effect sizes used frameshifted non-ORF nonoverlapping genes as the non-genic control. In this model, frame, gene designation, species, and homology group terms were retained in the model with p = 5×10 −20 , 1×10 −6 , 9×10 −19 , and 2×10 −3 respectively. All four terms were also easily retained in all other model variants exploring different non-genic controls.
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