Author: Tsuyoshi Sekizuka; Kentaro Itokawa; Tsutomu Kageyama; Shinji Saito; Ikuyo Takayama; Hideki Asanuma; Nao Naganori; Rina Tanaka; Masanori Hashino; Takuri Takahashi; Hajime Kamiya; Takuya Yamagishi; Kensaku Kakimoto; Motoi Suzuki; Hideki Hasegawa; Takaji Wakita; Makoto Kuroda
Title: Haplotype networks of SARS-CoV-2 infections in the Diamond Princess cruise ship outbreak Document date: 2020_3_27
ID: 7vuejy26_21
Snippet: A) Comparative median-joining SNV network analysis obtained from whole genome sequences of 73 SARS-CoV-2 isolates (Feb. 15-17, 2020) on the Diamond Princess (DP) cruise ship off Yokohama in Japan compared with all GISAID-available SARS-CoV-2 genomes (n=248, 5 updated on March 10, 2020). B) Clusters of the DP isolates (n=73) and Wuhan-Hu-1 were selected from the network shown in Fig. 2A to identify the strain that was first spread (indicated A, n=.....
Document: A) Comparative median-joining SNV network analysis obtained from whole genome sequences of 73 SARS-CoV-2 isolates (Feb. 15-17, 2020) on the Diamond Princess (DP) cruise ship off Yokohama in Japan compared with all GISAID-available SARS-CoV-2 genomes (n=248, 5 updated on March 10, 2020). B) Clusters of the DP isolates (n=73) and Wuhan-Hu-1 were selected from the network shown in Fig. 2A to identify the strain that was first spread (indicated A, n=29 isolates) and subsequent transmissions (indicated B, n=5 isolates; indicated C, n=6 isolates; and the other 33 isolates). Information on each isolate can be obtained in Supplementary Table S1 . A possible transmission between partners in same cabin after the quarantine is shown 10 by thick arrows between isolate nodes.
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