Author: Lars S Jermiin; Renee A Catullo; Barbara R Holland
Title: A new phylogenetic protocol: Dealing with model misspecification and confirmation bias in molecular phylogenetics Document date: 2018_8_27
ID: hr6wfx4g_1
Snippet: Molecular phylogenetics plays a pivotal role in the analysis of genomic data and has already had a significant, wide-reaching impact in science, industry, government, public health, and society (Table 1 (1-41)). Although the science and methodology behind applied phylogenetics is increasingly well understood within parts of the scientific community (42), there is still a worryingly large body of research where the phylogenetic analysis was done w.....
Document: Molecular phylogenetics plays a pivotal role in the analysis of genomic data and has already had a significant, wide-reaching impact in science, industry, government, public health, and society (Table 1 (1-41)). Although the science and methodology behind applied phylogenetics is increasingly well understood within parts of the scientific community (42), there is still a worryingly large body of research where the phylogenetic analysis was done with little attention to the consequences of a statistical misfit between the phylogenetic data and the assumptions that underpin the phylogenetic methods.
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