Selected article for: "supplementary table and table s1"
Author: Gal Haimovich; Tsviya Olender; Camila Baez; Jeffrey E Gerst
Title: Identification and enrichment of SECReTE cis-acting RNA elements in the Coronaviridae and other (+) single-strand RNA viruses
  • Document date: 2020_4_20
    • ID: 2bh5j5p0_14
    Snippet: Similar to the situation in yeast and human mRNAs, SECReTE elements are mainly found in genes encoding secretome proteins [i.e. secreted proteins likely to possess transmembrane domains (TMDs) and/or signal peptides (SP) 6 and Supplementary Table S3 ]. In SARS-CoV-2, fourteen SECReTE elements are found in TMDs out of a total of twenty-seven TMDs, and two elements were found in SPs out of total of three SPs present ( Figure 1A and Supplementary .....
    Document: Similar to the situation in yeast and human mRNAs, SECReTE elements are mainly found in genes encoding secretome proteins [i.e. secreted proteins likely to possess transmembrane domains (TMDs) and/or signal peptides (SP) 6 and Supplementary Table S3 ]. In SARS-CoV-2, fourteen SECReTE elements are found in TMDs out of a total of twenty-seven TMDs, and two elements were found in SPs out of total of three SPs present ( Figure 1A and Supplementary Table S1 Table S1 ). Note that in hCoV-229E, there is no SECReTE in the TMD sequence, but there is a SECReTE motif (SECReTE44 of hCoV-229E) downstream and almost parallel in position to SECReTE33 of SARS-CoV-2.

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