Author: Rashmi Mohanty; Xinquan Liu; Jae You Kim; Xiujuan Peng; Sahil Bhandari; Jasmim Leal; Dhivya Arasappan; Dennis C. Wylie; Tony Dong; Debadyuti Ghosh
Title: Identification of peptide coatings that enhance diffusive transport of nanoparticles through the tumor microenvironment Document date: 2019_6_4
ID: e2uzk4u1_77
Snippet: The MiSeq sequencing data was analyzed using Stampede supercomputer at the Texas Advanced Computing Center in collaboration with the Center for Computational Biology and Bioinformatics at UT-Austin. The fastq file was first demultiplexed based on the cluster's index sequence using MiSeq Reporter, and the quality of the fastq files was checked with FastQC version 0.11.5. The fastq files were converted to fasta format using fastx-toolkit to filter .....
Document: The MiSeq sequencing data was analyzed using Stampede supercomputer at the Texas Advanced Computing Center in collaboration with the Center for Computational Biology and Bioinformatics at UT-Austin. The fastq file was first demultiplexed based on the cluster's index sequence using MiSeq Reporter, and the quality of the fastq files was checked with FastQC version 0.11.5. The fastq files were converted to fasta format using fastx-toolkit to filter out the low-quality sequence reads. The variable region encoding for the CX7C sequence was isolated using a
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