Author: Markus Luczak-Roesch
Title: Networks of information token recurrences derived from genomic sequences may reveal hidden patterns in epidemic outbreaks: A case study of the 2019-nCoV coronavirus. Document date: 2020_2_11
ID: kevrp8rg_12
Snippet: An example of the particular encoding we use is visualised in Figure 1 . It is this tokenisation of the original nucleotide sequences that we use in the TIC approach to construct the information token recurrence network from. This means in our TIC instantiation the nodes represent distinct nucleotide sequences of the virus obtained from patient samples ordered by the date of their collection by researchers (random order in case of same date colle.....
Document: An example of the particular encoding we use is visualised in Figure 1 . It is this tokenisation of the original nucleotide sequences that we use in the TIC approach to construct the information token recurrence network from. This means in our TIC instantiation the nodes represent distinct nucleotide sequences of the virus obtained from patient samples ordered by the date of their collection by researchers (random order in case of same date collections). The edges are unique codon identifier recurrences matched between different nucleotide sequences.
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