Author: Jiao Chen; Jiayu Shang; Jianrong Wang; Yanni Sun
Title: A binning tool to reconstruct viral haplotypes from assembled contigs Document date: 2019_7_16
ID: 2basllfv_10
Snippet: Recently, there are a couple of newly developed tools for strain level analysis from metagenomic data, such as Constrain (Luo et al., 2015) and StrainPhlAn (Truong et al., 2017) . Both rely on species identification using clade-specific genes, then zoom in to identify the strains. However, both tools were mainly tested on bacteria......
Document: Recently, there are a couple of newly developed tools for strain level analysis from metagenomic data, such as Constrain (Luo et al., 2015) and StrainPhlAn (Truong et al., 2017) . Both rely on species identification using clade-specific genes, then zoom in to identify the strains. However, both tools were mainly tested on bacteria.
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