Author: Fabiana Renzi; Dario Ghersi
Title: ACE2 fragment as a decoy for novel SARS-Cov-2 virus Document date: 2020_4_10
ID: 77ku0164_7
Snippet: To determine whether the two helices do in fact remain stable in complex with the S-protein, we performed a 100 ns MD simulation of this complex. We visually inspected the trajectory and computed the root mean square deviation (RMSD) 2 residues are color-coded as in Figure 2 , with red for residues with an interaction energy < -1 and yellow for residues with an interaction energy between 0 and -1. The corresponding residues in SARS-Cov (as determ.....
Document: To determine whether the two helices do in fact remain stable in complex with the S-protein, we performed a 100 ns MD simulation of this complex. We visually inspected the trajectory and computed the root mean square deviation (RMSD) 2 residues are color-coded as in Figure 2 , with red for residues with an interaction energy < -1 and yellow for residues with an interaction energy between 0 and -1. The corresponding residues in SARS-Cov (as determined by structural superposition with SARS-Cov-2) are included as well.
Search related documents:
Co phrase search for related documents- complex MD simulation and MD simulation: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24
- interaction energy and MD simulation: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14
- interaction energy residue and MD simulation: 1, 2
- MD simulation and RMSD square deviation: 1, 2, 3, 4, 5, 6, 7, 8
- MD simulation and RMSD square deviation mean: 1, 2, 3, 4, 5, 6, 7, 8
- MD simulation and root RMSD square deviation mean: 1, 2, 3, 4, 5, 6, 7, 8
- MD simulation and square deviation: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
- RMSD square deviation and root RMSD square deviation mean: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25
- RMSD square deviation and root RMSD square deviation mean compute: 1
- RMSD square deviation and square deviation: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25
- RMSD square deviation mean and root RMSD square deviation mean: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25
- RMSD square deviation mean and root RMSD square deviation mean compute: 1
- RMSD square deviation mean and square deviation: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25
- root RMSD square deviation mean and square deviation: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25
- root RMSD square deviation mean compute and square deviation: 1
Co phrase search for related documents, hyperlinks ordered by date